Title:
METHOD FOR IDENTIFICATION OF VARIETY OF HEVEA BRASILIENSIS, AND KIT FOR IDENTIFICATION OF VARIETY OF HEVEA BRASILIENSIS
Document Type and Number:
WIPO Patent Application WO/2009/091074
Kind Code:
A1
Abstract:
Disclosed is a method which can identify the variety of a plant Hevea brasiliensis
accurately and in a simple manner. Specifically disclosed is a method for identifying
the variety of a plant Hevea brasiliensis, which is characterized by
identifying the variety of the plant Hevea brasiliensis based on at least
one criterion selected from the following items: the presence or absence of a
DNA fragment which is amplified by carrying out PCR by using genomic DNA extracted
from the plant Hevea brasiliensis as a template and using at least one
primer set selected from the following primer sets: a primer comprising the nucleotide
sequence depicted in SEQ ID NO:1 and a primer comprising the nucleotide sequence
depicted in SEQ ID NO:2; a primer comprising the nucleotide sequence depicted
in SEQ ID NO:3 and a primer comprising the nucleotide sequence depicted in SEQ
ID NO:4; a primer comprising the nucleotide sequence depicted in SEQ ID NO:5 and
a primer comprising the nucleotide sequence depicted in SEQ ID NO:6; a primer
comprising the nucleotide sequence depicted in SEQ ID NO:7 and a primer comprising
the nucleotide sequence depicted in SEQ ID NO:8; a primer comprising the nucleotide
sequence depicted in SEQ ID NO:9 and a primer comprising the nucleotide sequence
depicted in SEQ ID NO:10; a primer comprising the nucleotide sequence depicted
in SEQ ID NO:11 and a primer comprising the nucleotide sequence depicted in SEQ
ID NO:12; a primer comprising the nucleotide sequence depicted in SEQ ID NO:13
and a primer comprising the nucleotide sequence depicted in SEQ ID NO:14; and
a primer comprising the nucleotide sequence depicted in SEQ ID NO:15 and a primer
comprising the nucleotide sequence depicted in SEQ ID NO:16; the length of the
DNA fragment; and the digestion pattern of the DNA fragment with a restriction
enzyme. Also disclosed is a variety identification kit for achieving the method.
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Inventors:
OKUMURA SATORU (JP)
Application Number:
PCT/JP2009/050914
Publication Date:
July 23, 2009
Filing Date:
January 15, 2009
Export Citation:
Assignee:
BRIDGESTONE CORP (JP)
BADAN PENGKAJIAN DAN PENERAPAN (ID)
OKUMURA SATORU (JP)
BADAN PENGKAJIAN DAN PENERAPAN (ID)
OKUMURA SATORU (JP)
International Classes:
C12Q1/68; C12N15/09
Other References:
DATABASE GENBANK DDBJ/EMBL; 14 April 2004 (2004-04-14), SEGUIN, M. ET AL., retrieved from http://www.ncbi.nlm.nih.gov/ entrez/viewer.fcgi?db=nuccore&id=46326480 Database accession no. AY486624
DATABASE GENBANK DDBJ/EMBL; 21 April 2005 (2005-04-21), SAHA, T. ET AL., retrieved from http://www.ncbi.nlm.nih.gov/ entrez/viewer.fcgi?db=nuccore&id=23296058 Database accession no. AY135656
VENKATACHALAM, P. ET AL.: "Molecular cloning and sequencing of a polymorphic band from rubber tree [Hevea brasiliensis (Muell.) Arg.]: the nucleotide sequence revealed partial homology with proline-specific permease gene sequence.", CURRENT SCIENCE, vol. 90, no. 11, 2006, pages 1510 - 1515
DAS, M. ET AL.: "Generation and Characterization of SCARs by Cloning and Sequencing of RAPD Products: A Strategy for Species-specific Marker Development in Bamboo.", ANNALS OF BOTANY, vol. 95, 2005, pages 835 - 841
PARAN, I. ET AL.: "Development of reliable PCR- based markers linked to downy mildew resistance genes in lettuce.", THEORETICAL AND APPLIED GENETICS, vol. 85, 1993, pages 985 - 993
LEE, G.P. ET AL.: "Molecular markers derived from RAPD, SCAR, and the conserved 18S rDNA sequences for classification and identification in Pyrus pyrifolia and P. communis.", THEORETICAL AND APPLIED GENETICS, vol. 108, 2004, pages 1487 - 1491
DATABASE GENBANK DDBJ/EMBL; 21 April 2005 (2005-04-21), SAHA, T. ET AL., retrieved from http://www.ncbi.nlm.nih.gov/ entrez/viewer.fcgi?db=nuccore&id=23296058 Database accession no. AY135656
VENKATACHALAM, P. ET AL.: "Molecular cloning and sequencing of a polymorphic band from rubber tree [Hevea brasiliensis (Muell.) Arg.]: the nucleotide sequence revealed partial homology with proline-specific permease gene sequence.", CURRENT SCIENCE, vol. 90, no. 11, 2006, pages 1510 - 1515
DAS, M. ET AL.: "Generation and Characterization of SCARs by Cloning and Sequencing of RAPD Products: A Strategy for Species-specific Marker Development in Bamboo.", ANNALS OF BOTANY, vol. 95, 2005, pages 835 - 841
PARAN, I. ET AL.: "Development of reliable PCR- based markers linked to downy mildew resistance genes in lettuce.", THEORETICAL AND APPLIED GENETICS, vol. 85, 1993, pages 985 - 993
LEE, G.P. ET AL.: "Molecular markers derived from RAPD, SCAR, and the conserved 18S rDNA sequences for classification and identification in Pyrus pyrifolia and P. communis.", THEORETICAL AND APPLIED GENETICS, vol. 108, 2004, pages 1487 - 1491
Attorney, Agent or Firm:
SUGIMURA, Kenji et al. (3-2-1 Kasumigaseki,Chiyoda-k, Tokyo 13, JP)
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